Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF13O43567 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 AL365330.1-201ENST00000607459 531 ntBASIC14.63□□□□□ -0.07
RNF13O43567 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF13O43567 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF13O43567 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF13O43567 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF13O43567 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF13O43567 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF13O43567 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF13O43567 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF13O43567 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RNF13O43567 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 AP002414.2-201ENST00000591780 3365 ntBASIC14.62□□□□□ -0.07
RNF13O43567 AP003680.1-201ENST00000598970 3660 ntBASIC14.62□□□□□ -0.07
RNF13O43567 AC091812.2-201ENST00000619081 385 ntBASIC14.62□□□□□ -0.07
RNF13O43567 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 AC023157.3-201ENST00000619086 2088 ntBASIC14.62□□□□□ -0.07
RNF13O43567 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
RNF13O43567 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.62□□□□□ -0.07
RNF13O43567 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
RNF13O43567 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.62□□□□□ -0.07
RNF13O43567 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RNF13O43567 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.62□□□□□ -0.07
RNF13O43567 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 AL589702.1-201ENST00000641229 1509 ntBASIC14.61□□□□□ -0.07
RNF13O43567 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF13O43567 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF13O43567 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
RNF13O43567 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RNF13O43567 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RNF13O43567 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.61□□□□□ -0.07
RNF13O43567 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.61□□□□□ -0.07
RNF13O43567 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF13O43567 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.61□□□□□ -0.07
RNF13O43567 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.61□□□□□ -0.07
RNF13O43567 KRT18P58-201ENST00000527480 1120 ntBASIC14.61□□□□□ -0.07
RNF13O43567 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 AC040169.1-201ENST00000565382 521 ntBASIC14.61□□□□□ -0.07
RNF13O43567 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF13O43567 AC099522.2-201ENST00000607001 744 ntBASIC14.61□□□□□ -0.07
RNF13O43567 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF13O43567 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms