Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
XRCC2O43543 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.97□□□□□ -0.17
XRCC2O43543 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.96□□□□□ -0.17
XRCC2O43543 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.96□□□□□ -0.17
XRCC2O43543 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 FOXO1B-201ENST00000504678 1527 ntBASIC13.96□□□□□ -0.17
XRCC2O43543 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
XRCC2O43543 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.96□□□□□ -0.17
XRCC2O43543 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 MIR346-201ENST00000362234 95 ntBASIC13.96□□□□□ -0.17
XRCC2O43543 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.96□□□□□ -0.17
XRCC2O43543 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.96□□□□□ -0.17
XRCC2O43543 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.96□□□□□ -0.17
XRCC2O43543 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.96□□□□□ -0.17
XRCC2O43543 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 KRT8P48-201ENST00000515599 1220 ntBASIC13.96□□□□□ -0.17
XRCC2O43543 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.96□□□□□ -0.17
XRCC2O43543 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
XRCC2O43543 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.96□□□□□ -0.17
XRCC2O43543 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
XRCC2O43543 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
XRCC2O43543 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
XRCC2O43543 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.96□□□□□ -0.18
XRCC2O43543 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.96□□□□□ -0.18
XRCC2O43543 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
XRCC2O43543 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
XRCC2O43543 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
XRCC2O43543 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
XRCC2O43543 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.96□□□□□ -0.18
XRCC2O43543 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
XRCC2O43543 ELL2P1-201ENST00000413990 1906 ntBASIC13.96□□□□□ -0.18
XRCC2O43543 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
XRCC2O43543 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.95□□□□□ -0.18
XRCC2O43543 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
XRCC2O43543 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
XRCC2O43543 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.95□□□□□ -0.18
XRCC2O43543 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.95□□□□□ -0.18
XRCC2O43543 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.95□□□□□ -0.18
XRCC2O43543 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.95□□□□□ -0.18
XRCC2O43543 AC005829.1-201ENST00000570002 483 ntBASIC13.95□□□□□ -0.18
XRCC2O43543 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.95□□□□□ -0.18
XRCC2O43543 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
XRCC2O43543 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
XRCC2O43543 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.95□□□□□ -0.18
XRCC2O43543 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms