Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TNRC18O15417 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TNRC18O15417 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC16.83■□□□□ 0.28
TNRC18O15417 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.83■□□□□ 0.28
TNRC18O15417 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.83■□□□□ 0.28
TNRC18O15417 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
TNRC18O15417 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.83■□□□□ 0.28
TNRC18O15417 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TNRC18O15417 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TNRC18O15417 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNRC18O15417 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.83■□□□□ 0.28
TNRC18O15417 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.83■□□□□ 0.28
TNRC18O15417 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNRC18O15417 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TNRC18O15417 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNRC18O15417 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.83■□□□□ 0.28
TNRC18O15417 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.83■□□□□ 0.28
TNRC18O15417 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.82■□□□□ 0.28
TNRC18O15417 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC16.82■□□□□ 0.28
TNRC18O15417 RN7SL494P-201ENST00000461517 304 ntBASIC16.82■□□□□ 0.28
TNRC18O15417 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.82■□□□□ 0.28
TNRC18O15417 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TNRC18O15417 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TNRC18O15417 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.82■□□□□ 0.28
TNRC18O15417 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TNRC18O15417 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.82■□□□□ 0.28
TNRC18O15417 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 AC083801.1-201ENST00000491689 358 ntBASIC16.82■□□□□ 0.28
TNRC18O15417 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.82■□□□□ 0.28
TNRC18O15417 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TNRC18O15417 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNRC18O15417 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.82■□□□□ 0.28
TNRC18O15417 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.81■□□□□ 0.28
TNRC18O15417 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.81■□□□□ 0.28
TNRC18O15417 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 BX088651.3-201ENST00000418155 352 ntBASIC16.81■□□□□ 0.28
TNRC18O15417 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 RBM4-207ENST00000506523 654 ntTSL 3 BASIC16.81■□□□□ 0.28
TNRC18O15417 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC16.81■□□□□ 0.28
TNRC18O15417 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.81■□□□□ 0.28
TNRC18O15417 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TNRC18O15417 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.81■□□□□ 0.28
TNRC18O15417 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TNRC18O15417 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.81■□□□□ 0.28
TNRC18O15417 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.81■□□□□ 0.28
TNRC18O15417 AP005212.2-201ENST00000584979 510 ntBASIC16.81■□□□□ 0.28
TNRC18O15417 OR10B1P-201ENST00000601666 907 ntBASIC16.81■□□□□ 0.28
TNRC18O15417 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC16.81■□□□□ 0.28
TNRC18O15417 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.81■□□□□ 0.28
TNRC18O15417 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.81■□□□□ 0.28
TNRC18O15417 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.81■□□□□ 0.28
TNRC18O15417 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.81■□□□□ 0.28
TNRC18O15417 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNRC18O15417 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TNRC18O15417 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.8■□□□□ 0.28
TNRC18O15417 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.8■□□□□ 0.28
TNRC18O15417 PHBP15-201ENST00000574228 665 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms