Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM3A6NNA2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM3A6NNA2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SRRM3A6NNA2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
SRRM3A6NNA2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SRRM3A6NNA2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 AC096734.2-201ENST00000562054 433 ntBASIC16.64■□□□□ 0.25
SRRM3A6NNA2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 AC008667.4-201ENST00000607370 168 ntBASIC16.64■□□□□ 0.25
SRRM3A6NNA2 AC073592.5-201ENST00000624854 528 ntBASIC16.64■□□□□ 0.25
SRRM3A6NNA2 AL353593.2-201ENST00000602529 1483 ntBASIC16.64■□□□□ 0.25
SRRM3A6NNA2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 AC106881.1-201ENST00000605849 3329 ntBASIC16.64■□□□□ 0.25
SRRM3A6NNA2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 SNX33P1-201ENST00000592116 1762 ntBASIC16.64■□□□□ 0.25
SRRM3A6NNA2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 PMPCAP1-201ENST00000508114 1576 ntBASIC16.64■□□□□ 0.25
SRRM3A6NNA2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SRRM3A6NNA2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 LINC01144-201ENST00000626198 1710 ntBASIC16.63■□□□□ 0.25
SRRM3A6NNA2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 AC027307.3-201ENST00000594262 1100 ntBASIC16.63■□□□□ 0.25
SRRM3A6NNA2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 PRAL-201ENST00000624952 3286 ntBASIC16.63■□□□□ 0.25
SRRM3A6NNA2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SRRM3A6NNA2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AL512652.2-201ENST00000625156 1716 ntBASIC16.62■□□□□ 0.25
SRRM3A6NNA2 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SRRM3A6NNA2 AL031731.1-201ENST00000642131 2094 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms