Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 AC092580.3-201ENST00000430932 139 ntBASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 RNA5SP410-201ENST00000516285 106 ntBASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 IGHV3-42-201ENST00000520410 361 ntBASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 AJ011932.1-201ENST00000621707 465 ntBASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 AD000864.1-201ENST00000624076 2295 ntBASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 AL589702.1-201ENST00000641229 1509 ntBASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRCOL1A6NCL2 PCGF3-213ENST00000620529 1899 ntBASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 AL353705.2-201ENST00000428243 662 ntBASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 INGX-202ENST00000489074 768 ntBASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 AL390754.1-201ENST00000619088 582 ntBASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LRCOL1A6NCL2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms