Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC015911.4-201ENST00000588022 1070 ntBASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MIR6080-201ENST00000617359 66 ntBASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.93□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 IGHV3-42-201ENST00000520410 361 ntBASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ALG1L8P-201ENST00000533887 760 ntBASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SPCS2P1-201ENST00000561636 679 ntBASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AL096865.1-201ENST00000606796 927 ntBASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 AC112504.1-201ENST00000623415 1841 ntBASIC12.91□□□□□ -0.34
TCRBV4S1A1TA0A5B7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms