Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 AL645939.2-201ENST00000427340 991 ntBASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 CICP14-201ENST00000629111 2732 ntBASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TCRBV3S1A0A5B6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 AC025062.2-201ENST00000605477 670 ntBASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 ACTL9-202ENST00000612068 1252 ntBASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 NPAP1P7-201ENST00000613027 823 ntBASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TCRBV3S1A0A5B6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.97□□□□□ -0.01
TCRBV3S1A0A5B6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms