Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 AC018445.4-201ENST00000624066 2291 ntBASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TMEM198B-204ENST00000484016 896 ntBASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 AC019171.1-201ENST00000601251 1056 ntBASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 DDO-201ENST00000368923 1953 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 AC097359.2-201ENST00000604992 2389 ntBASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 AC026797.1-201ENST00000624837 2869 ntBASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDC42SE1Q9NRR8 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CCNA1-201ENST00000255465 1879 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CDC42SE1Q9NRR8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms