Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VTA1Q9NP79 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.77■□□□□ 0.44
VTA1Q9NP79 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VTA1Q9NP79 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
VTA1Q9NP79 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
VTA1Q9NP79 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.77■□□□□ 0.43
VTA1Q9NP79 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VTA1Q9NP79 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VTA1Q9NP79 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.77■□□□□ 0.43
VTA1Q9NP79 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VTA1Q9NP79 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VTA1Q9NP79 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 AC022211.2-201ENST00000585075 2527 ntBASIC17.76■□□□□ 0.43
VTA1Q9NP79 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 BAATP1-201ENST00000412284 1225 ntBASIC17.76■□□□□ 0.43
VTA1Q9NP79 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 RPL7P3-201ENST00000441388 714 ntBASIC17.76■□□□□ 0.43
VTA1Q9NP79 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.76■□□□□ 0.43
VTA1Q9NP79 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VTA1Q9NP79 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 AC092933.1-201ENST00000393644 945 ntBASIC17.75■□□□□ 0.43
VTA1Q9NP79 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 AC012441.1-201ENST00000446669 685 ntBASIC17.75■□□□□ 0.43
VTA1Q9NP79 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 FO681548.1-201ENST00000455617 1132 ntBASIC17.75■□□□□ 0.43
VTA1Q9NP79 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 AC005252.2-201ENST00000624630 1141 ntBASIC17.75■□□□□ 0.43
VTA1Q9NP79 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 AGGF1P2-201ENST00000426656 2106 ntBASIC17.75■□□□□ 0.43
VTA1Q9NP79 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VTA1Q9NP79 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.75■□□□□ 0.43
VTA1Q9NP79 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTA1Q9NP79 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VTA1Q9NP79 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms