Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC125807.1-201ENST00000483097 614 ntBASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 AC069262.1-201ENST00000539058 672 ntBASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 AL512652.2-201ENST00000625156 1716 ntBASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PCGF1Q9BSM1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 AC073439.1-201ENST00000624121 1774 ntBASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 MIR346-201ENST00000362234 95 ntBASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 SPDYE14P-201ENST00000442619 822 ntBASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 AC011467.4-201ENST00000594891 528 ntBASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 AC020765.3-201ENST00000613051 740 ntBASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PCGF1Q9BSM1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AC008677.1-201ENST00000519230 1561 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.5□□□□□ -0.25
PCGF1Q9BSM1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms