Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AL136379.1-201ENST00000623471 2642 ntBASIC16.31■□□□□ 0.2
PTCD2Q8WV60 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.31■□□□□ 0.2
PTCD2Q8WV60 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.3■□□□□ 0.2
PTCD2Q8WV60 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 RPS20P25-201ENST00000412447 352 ntBASIC16.3■□□□□ 0.2
PTCD2Q8WV60 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 KRT8P23-201ENST00000560090 1207 ntBASIC16.3■□□□□ 0.2
PTCD2Q8WV60 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 AC008147.4-201ENST00000617570 1204 ntBASIC16.3■□□□□ 0.2
PTCD2Q8WV60 AC093512.1-201ENST00000617969 520 ntBASIC16.3■□□□□ 0.2
PTCD2Q8WV60 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTCD2Q8WV60 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AC117500.1-201ENST00000497352 755 ntBASIC16.29■□□□□ 0.2
PTCD2Q8WV60 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 SPTSSB-204ENST00000617024 1292 ntBASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTCD2Q8WV60 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTCD2Q8WV60 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms