Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 MYO15B-237ENST00000642007 4893 ntBASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 RNF152P1-201ENST00000397754 604 ntBASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 SIGLEC30P-201ENST00000455569 941 ntBASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 AC090616.6-201ENST00000582640 721 ntBASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 CR383656.2-201ENST00000548656 2254 ntBASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.12□□□□□ -0.15
LYSMD2Q8IV50 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 SBF1P1-201ENST00000444527 5631 ntBASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.11□□□□□ -0.15
LYSMD2Q8IV50 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 AC073508.3-201ENST00000619697 1419 ntBASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 AC087499.1-201ENST00000418141 1075 ntBASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 AC091607.1-201ENST00000490318 1060 ntBASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LYSMD2Q8IV50 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms