Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF546Q86UE3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 TOP3BP1-201ENST00000420768 1380 ntBASIC13.38□□□□□ -0.27
ZNF546Q86UE3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 AC139887.4-201ENST00000607877 719 ntBASIC13.38□□□□□ -0.27
ZNF546Q86UE3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ZNF546Q86UE3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 LINC01230-201ENST00000625222 3017 ntBASIC13.37□□□□□ -0.27
ZNF546Q86UE3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 NUS1P1-201ENST00000446295 882 ntBASIC13.37□□□□□ -0.27
ZNF546Q86UE3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.37□□□□□ -0.27
ZNF546Q86UE3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms