Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 DNAJB3-201ENST00000446806 729 ntBASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 AL691432.1-201ENST00000596308 1422 ntBASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
HIST2H3AQ71DI3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 HLA-H-201ENST00000383620 1096 ntBASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 TIMM8BP1-201ENST00000452384 211 ntBASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 AC069335.1-201ENST00000489972 472 ntBASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 IGHV3-62-201ENST00000520057 340 ntBASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 AC105339.1-204ENST00000636249 355 ntBASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST2H3AQ71DI3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms