Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
BSXQ3C1V8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
BSXQ3C1V8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13□□□□□ -0.33
BSXQ3C1V8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
BSXQ3C1V8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13□□□□□ -0.33
BSXQ3C1V8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
BSXQ3C1V8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13□□□□□ -0.33
BSXQ3C1V8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
BSXQ3C1V8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 CD99-202ENST00000381180 530 ntTSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13□□□□□ -0.33
BSXQ3C1V8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13□□□□□ -0.33
BSXQ3C1V8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
BSXQ3C1V8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13□□□□□ -0.33
BSXQ3C1V8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13□□□□□ -0.33
BSXQ3C1V8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13□□□□□ -0.33
BSXQ3C1V8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13□□□□□ -0.33
BSXQ3C1V8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
BSXQ3C1V8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 AL359258.3-201ENST00000622910 2331 ntBASIC12.99□□□□□ -0.33
BSXQ3C1V8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 AC018712.1-201ENST00000455767 687 ntBASIC12.99□□□□□ -0.33
BSXQ3C1V8 RNPS1P1-201ENST00000507437 918 ntBASIC12.99□□□□□ -0.33
BSXQ3C1V8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 AC105339.3-201ENST00000560043 636 ntBASIC12.99□□□□□ -0.33
BSXQ3C1V8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
BSXQ3C1V8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.99□□□□□ -0.33
BSXQ3C1V8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms