Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.33□□□□□ -0.12
H3F3AP84243 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 REXO1L1P-202ENST00000608646 1974 ntBASIC14.33□□□□□ -0.12
H3F3AP84243 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.32□□□□□ -0.12
H3F3AP84243 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H3F3AP84243 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
H3F3AP84243 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H3F3AP84243 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
H3F3AP84243 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
H3F3AP84243 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3AP84243 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 AC107890.1-201ENST00000422478 521 ntBASIC14.32□□□□□ -0.12
H3F3AP84243 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3AP84243 PMS2P2-201ENST00000425039 1128 ntBASIC14.32□□□□□ -0.12
H3F3AP84243 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 MTND6P24-201ENST00000440466 518 ntBASIC14.32□□□□□ -0.12
H3F3AP84243 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
H3F3AP84243 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 AC125807.1-201ENST00000483097 614 ntBASIC14.32□□□□□ -0.12
H3F3AP84243 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.32□□□□□ -0.12
H3F3AP84243 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.32□□□□□ -0.12
H3F3AP84243 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3AP84243 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3AP84243 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3AP84243 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.32□□□□□ -0.12
H3F3AP84243 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.32□□□□□ -0.12
H3F3AP84243 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.32□□□□□ -0.12
H3F3AP84243 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H3F3AP84243 CETN4P-206ENST00000642099 2168 ntBASIC14.32□□□□□ -0.12
H3F3AP84243 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3AP84243 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3AP84243 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3AP84243 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H3F3AP84243 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3AP84243 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3AP84243 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 RPL37AP1-201ENST00000412502 279 ntBASIC14.31□□□□□ -0.12
H3F3AP84243 AL080243.2-201ENST00000418783 582 ntBASIC14.31□□□□□ -0.12
H3F3AP84243 HIST3H2BA-201ENST00000436555 524 ntBASIC14.31□□□□□ -0.12
H3F3AP84243 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.31□□□□□ -0.12
H3F3AP84243 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.31□□□□□ -0.12
H3F3AP84243 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3AP84243 AC069120.2-201ENST00000524091 540 ntBASIC14.31□□□□□ -0.12
H3F3AP84243 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H3F3AP84243 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.31□□□□□ -0.12
H3F3AP84243 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.31□□□□□ -0.12
H3F3AP84243 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.31□□□□□ -0.12
H3F3AP84243 AL158211.3-201ENST00000607385 239 ntBASIC14.31□□□□□ -0.12
H3F3AP84243 AL589739.1-201ENST00000607720 493 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms