Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
IRX4P78413 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.76■□□□□ 0.27
IRX4P78413 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.76■□□□□ 0.27
IRX4P78413 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.76■□□□□ 0.27
IRX4P78413 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.76■□□□□ 0.27
IRX4P78413 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.76■□□□□ 0.27
IRX4P78413 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
IRX4P78413 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.76■□□□□ 0.27
IRX4P78413 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 HMGA1P7-201ENST00000406908 502 ntBASIC16.76■□□□□ 0.27
IRX4P78413 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.76■□□□□ 0.27
IRX4P78413 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.76■□□□□ 0.27
IRX4P78413 CRB3P1-201ENST00000449338 276 ntBASIC16.76■□□□□ 0.27
IRX4P78413 MEIS3P1-201ENST00000495167 958 ntBASIC16.76■□□□□ 0.27
IRX4P78413 AC069120.2-201ENST00000524091 540 ntBASIC16.76■□□□□ 0.27
IRX4P78413 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.76■□□□□ 0.27
IRX4P78413 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
IRX4P78413 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.76■□□□□ 0.27
IRX4P78413 KRT8P23-201ENST00000560090 1207 ntBASIC16.76■□□□□ 0.27
IRX4P78413 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.76■□□□□ 0.27
IRX4P78413 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IRX4P78413 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.76■□□□□ 0.27
IRX4P78413 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
IRX4P78413 AL021920.2-201ENST00000624828 1351 ntBASIC16.76■□□□□ 0.27
IRX4P78413 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
IRX4P78413 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX4P78413 AC105917.1-201ENST00000506637 2539 ntBASIC16.75■□□□□ 0.27
IRX4P78413 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX4P78413 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX4P78413 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX4P78413 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IRX4P78413 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
IRX4P78413 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.75■□□□□ 0.27
IRX4P78413 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IRX4P78413 AC006538.1-201ENST00000567905 1585 ntBASIC16.75■□□□□ 0.27
IRX4P78413 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.75■□□□□ 0.27
IRX4P78413 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.75■□□□□ 0.27
IRX4P78413 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IRX4P78413 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
IRX4P78413 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.74■□□□□ 0.27
IRX4P78413 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.74■□□□□ 0.27
IRX4P78413 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 OR8S1-201ENST00000310194 1080 ntBASIC16.74■□□□□ 0.27
IRX4P78413 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.74■□□□□ 0.27
IRX4P78413 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.74■□□□□ 0.27
IRX4P78413 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 CR383656.12-201ENST00000549567 513 ntBASIC16.74■□□□□ 0.27
IRX4P78413 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 AC027307.3-201ENST00000594262 1100 ntBASIC16.74■□□□□ 0.27
IRX4P78413 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms