Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
VBP1P61758 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.42□□□□□ -0.1
VBP1P61758 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.42□□□□□ -0.1
VBP1P61758 AL158047.1-201ENST00000445918 881 ntBASIC14.42□□□□□ -0.1
VBP1P61758 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.42□□□□□ -0.1
VBP1P61758 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 AC011467.2-201ENST00000598425 242 ntBASIC14.42□□□□□ -0.1
VBP1P61758 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 KRT8P44-201ENST00000441609 1350 ntBASIC14.42□□□□□ -0.1
VBP1P61758 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.42□□□□□ -0.1
VBP1P61758 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VBP1P61758 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.42□□□□□ -0.1
VBP1P61758 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VBP1P61758 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VBP1P61758 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
VBP1P61758 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.41□□□□□ -0.1
VBP1P61758 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.41□□□□□ -0.1
VBP1P61758 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.41□□□□□ -0.1
VBP1P61758 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VBP1P61758 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VBP1P61758 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
VBP1P61758 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.41□□□□□ -0.1
VBP1P61758 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.41□□□□□ -0.1
VBP1P61758 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.41□□□□□ -0.1
VBP1P61758 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.41□□□□□ -0.1
VBP1P61758 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.41□□□□□ -0.1
VBP1P61758 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.41□□□□□ -0.1
VBP1P61758 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VBP1P61758 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
VBP1P61758 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
VBP1P61758 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
VBP1P61758 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.41□□□□□ -0.1
VBP1P61758 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VBP1P61758 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
VBP1P61758 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.41□□□□□ -0.1
VBP1P61758 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VBP1P61758 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
VBP1P61758 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms