Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CPT1AP50416 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.6■□□□□ 0.41
CPT1AP50416 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.6■□□□□ 0.41
CPT1AP50416 MIR4538-201ENST00000581377 78 ntBASIC17.6■□□□□ 0.41
CPT1AP50416 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.6■□□□□ 0.41
CPT1AP50416 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.6■□□□□ 0.41
CPT1AP50416 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.6■□□□□ 0.41
CPT1AP50416 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CPT1AP50416 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CPT1AP50416 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CPT1AP50416 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.6■□□□□ 0.41
CPT1AP50416 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPT1AP50416 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.59■□□□□ 0.41
CPT1AP50416 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPT1AP50416 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.59■□□□□ 0.41
CPT1AP50416 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CPT1AP50416 BRWD1P1-201ENST00000401091 371 ntBASIC17.59■□□□□ 0.41
CPT1AP50416 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.59■□□□□ 0.41
CPT1AP50416 AC016694.1-201ENST00000434179 700 ntBASIC17.59■□□□□ 0.41
CPT1AP50416 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.59■□□□□ 0.41
CPT1AP50416 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.59■□□□□ 0.41
CPT1AP50416 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CPT1AP50416 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.59■□□□□ 0.41
CPT1AP50416 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.59■□□□□ 0.41
CPT1AP50416 AC079316.1-201ENST00000548397 411 ntBASIC17.59■□□□□ 0.41
CPT1AP50416 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.59■□□□□ 0.41
CPT1AP50416 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.59■□□□□ 0.41
CPT1AP50416 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.59■□□□□ 0.41
CPT1AP50416 AC005252.2-201ENST00000624630 1141 ntBASIC17.59■□□□□ 0.41
CPT1AP50416 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.59■□□□□ 0.41
CPT1AP50416 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.59■□□□□ 0.41
CPT1AP50416 AC106886.4-201ENST00000623557 2502 ntBASIC17.59■□□□□ 0.41
CPT1AP50416 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPT1AP50416 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPT1AP50416 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPT1AP50416 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.58■□□□□ 0.41
CPT1AP50416 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPT1AP50416 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CPT1AP50416 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPT1AP50416 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPT1AP50416 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPT1AP50416 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
CPT1AP50416 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.58■□□□□ 0.4
CPT1AP50416 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.58■□□□□ 0.4
CPT1AP50416 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 MIR1908-201ENST00000410394 80 ntBASIC17.58■□□□□ 0.4
CPT1AP50416 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.58■□□□□ 0.4
CPT1AP50416 AC093433.1-201ENST00000458048 571 ntBASIC17.58■□□□□ 0.4
CPT1AP50416 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
CPT1AP50416 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.58■□□□□ 0.4
CPT1AP50416 FTH1P14-201ENST00000482930 551 ntBASIC17.58■□□□□ 0.4
CPT1AP50416 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.58■□□□□ 0.4
CPT1AP50416 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.58■□□□□ 0.4
CPT1AP50416 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.58■□□□□ 0.4
CPT1AP50416 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.58■□□□□ 0.4
CPT1AP50416 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
CPT1AP50416 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CPT1AP50416 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.58■□□□□ 0.4
CPT1AP50416 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPT1AP50416 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.57■□□□□ 0.4
CPT1AP50416 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPT1AP50416 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.57■□□□□ 0.4
CPT1AP50416 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms