Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT20P35900 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 AC092919.2-201ENST00000623631 1645 ntBASIC15.32■□□□□ 0.04
KRT20P35900 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT20P35900 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT20P35900 GGT4P-201ENST00000623672 1708 ntBASIC15.31■□□□□ 0.04
KRT20P35900 AC022532.1-201ENST00000624563 1728 ntBASIC15.31■□□□□ 0.04
KRT20P35900 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 PCGF3-213ENST00000620529 1899 ntBASIC15.31■□□□□ 0.04
KRT20P35900 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRT20P35900 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KRT20P35900 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT20P35900 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRT20P35900 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 YBX2P1-201ENST00000394192 760 ntBASIC15.31■□□□□ 0.04
KRT20P35900 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 AC092865.5-201ENST00000545435 363 ntBASIC15.31■□□□□ 0.04
KRT20P35900 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT20P35900 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
KRT20P35900 C20orf181-201ENST00000623918 480 ntBASIC15.31■□□□□ 0.04
KRT20P35900 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KRT20P35900 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 GGT3P-204ENST00000453783 1664 ntBASIC15.31■□□□□ 0.04
KRT20P35900 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KRT20P35900 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRT20P35900 AP005117.1-202ENST00000581724 1908 ntBASIC15.31■□□□□ 0.04
KRT20P35900 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 AC006449.6-201ENST00000612330 2296 ntBASIC15.31■□□□□ 0.04
KRT20P35900 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT20P35900 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
KRT20P35900 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT20P35900 TNRC18P2-201ENST00000417666 2714 ntBASIC15.3■□□□□ 0.04
KRT20P35900 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT20P35900 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 WASH6P-202ENST00000359512 1437 ntBASIC15.3■□□□□ 0.04
KRT20P35900 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT20P35900 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.3■□□□□ 0.04
KRT20P35900 AC092474.2-201ENST00000424288 719 ntBASIC15.3■□□□□ 0.04
KRT20P35900 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 ACTG1P14-201ENST00000446382 1122 ntBASIC15.3■□□□□ 0.04
KRT20P35900 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KRT20P35900 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
KRT20P35900 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT20P35900 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 FAM86C2P-203ENST00000528684 1004 ntBASIC15.3■□□□□ 0.04
KRT20P35900 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT20P35900 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT20P35900 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT20P35900 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT20P35900 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms