Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.93■□□□□ 0.3
CHKAP35790 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.93■□□□□ 0.3
CHKAP35790 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CHKAP35790 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHKAP35790 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHKAP35790 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CHKAP35790 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.93■□□□□ 0.3
CHKAP35790 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHKAP35790 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 AC069224.1-201ENST00000566372 1715 ntBASIC16.93■□□□□ 0.3
CHKAP35790 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.93■□□□□ 0.3
CHKAP35790 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHKAP35790 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CHKAP35790 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 AL035456.1-201ENST00000456064 1369 ntBASIC16.92■□□□□ 0.3
CHKAP35790 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.92■□□□□ 0.3
CHKAP35790 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 AC068418.2-201ENST00000577309 3703 ntBASIC16.92■□□□□ 0.3
CHKAP35790 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.92■□□□□ 0.3
CHKAP35790 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.92■□□□□ 0.3
CHKAP35790 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 TREML5P-201ENST00000421694 576 ntBASIC16.92■□□□□ 0.3
CHKAP35790 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.92■□□□□ 0.3
CHKAP35790 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.92■□□□□ 0.3
CHKAP35790 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 RNA5SP410-201ENST00000516285 106 ntBASIC16.92■□□□□ 0.3
CHKAP35790 IGHV3-42-201ENST00000520410 361 ntBASIC16.92■□□□□ 0.3
CHKAP35790 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 AC024267.1-201ENST00000582320 895 ntBASIC16.92■□□□□ 0.3
CHKAP35790 AL390955.2-201ENST00000603032 514 ntBASIC16.92■□□□□ 0.3
CHKAP35790 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
CHKAP35790 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.92■□□□□ 0.3
CHKAP35790 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.92■□□□□ 0.3
CHKAP35790 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHKAP35790 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CHKAP35790 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CHKAP35790 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.91■□□□□ 0.3
CHKAP35790 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
CHKAP35790 FO538757.1-201ENST00000623083 1397 ntBASIC16.91■□□□□ 0.3
CHKAP35790 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.91■□□□□ 0.3
CHKAP35790 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.91■□□□□ 0.3
CHKAP35790 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.91■□□□□ 0.3
CHKAP35790 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.91■□□□□ 0.3
CHKAP35790 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.91■□□□□ 0.3
CHKAP35790 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.91■□□□□ 0.3
CHKAP35790 BCRP1-201ENST00000444246 691 ntBASIC16.91■□□□□ 0.3
CHKAP35790 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.91■□□□□ 0.3
CHKAP35790 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.91■□□□□ 0.3
CHKAP35790 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.91■□□□□ 0.3
CHKAP35790 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.91■□□□□ 0.3
CHKAP35790 AJ011932.1-201ENST00000621707 465 ntBASIC16.91■□□□□ 0.3
CHKAP35790 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHKAP35790 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms