Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.75□□□□□ -0.05
SHC1P29353 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SHC1P29353 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHC1P29353 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 AC063926.3-201ENST00000624734 5658 ntBASIC14.74□□□□□ -0.05
SHC1P29353 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 AL139400.1-201ENST00000366220 510 ntBASIC14.74□□□□□ -0.05
SHC1P29353 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.74□□□□□ -0.05
SHC1P29353 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 AC084121.4-201ENST00000641598 221 ntBASIC14.74□□□□□ -0.05
SHC1P29353 AC079781.4-201ENST00000641908 219 ntBASIC14.74□□□□□ -0.05
SHC1P29353 AF228730.8-201ENST00000642140 221 ntBASIC14.74□□□□□ -0.05
SHC1P29353 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 NORAD-201ENST00000565493 5339 ntBASIC14.74□□□□□ -0.05
SHC1P29353 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.74□□□□□ -0.05
SHC1P29353 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
SHC1P29353 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHC1P29353 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.74□□□□□ -0.05
SHC1P29353 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 AC006449.6-201ENST00000612330 2296 ntBASIC14.73□□□□□ -0.05
SHC1P29353 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 AL589702.1-201ENST00000641229 1509 ntBASIC14.73□□□□□ -0.05
SHC1P29353 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SHC1P29353 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.73□□□□□ -0.05
SHC1P29353 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SHC1P29353 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.73□□□□□ -0.05
SHC1P29353 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.73□□□□□ -0.05
SHC1P29353 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.73□□□□□ -0.05
SHC1P29353 AC009093.7-201ENST00000623853 1223 ntBASIC14.73□□□□□ -0.05
SHC1P29353 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.73□□□□□ -0.05
SHC1P29353 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.73□□□□□ -0.05
SHC1P29353 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SHC1P29353 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SHC1P29353 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SHC1P29353 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SHC1P29353 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms