Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CD40P25942 AL035252.4-201ENST00000624174 288 ntBASIC13.78□□□□□ -0.2
CD40P25942 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.78□□□□□ -0.2
CD40P25942 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.78□□□□□ -0.2
CD40P25942 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CD40P25942 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CD40P25942 AC092364.2-201ENST00000596710 2692 ntBASIC13.78□□□□□ -0.2
CD40P25942 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 SLC7A15P-201ENST00000424028 1363 ntBASIC13.78□□□□□ -0.2
CD40P25942 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
CD40P25942 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.78□□□□□ -0.2
CD40P25942 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CD40P25942 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CD40P25942 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD40P25942 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD40P25942 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CD40P25942 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD40P25942 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD40P25942 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CD40P25942 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CD40P25942 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.77□□□□□ -0.21
CD40P25942 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.77□□□□□ -0.21
CD40P25942 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 AL589987.1-201ENST00000453380 819 ntBASIC13.77□□□□□ -0.21
CD40P25942 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CD40P25942 AC023310.3-201ENST00000557027 670 ntBASIC13.77□□□□□ -0.21
CD40P25942 AC100756.1-201ENST00000562736 682 ntBASIC13.77□□□□□ -0.21
CD40P25942 AL596325.1-201ENST00000563991 1082 ntBASIC13.77□□□□□ -0.21
CD40P25942 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 AC138749.3-201ENST00000567691 622 ntBASIC13.77□□□□□ -0.21
CD40P25942 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 REXO1L1P-202ENST00000608646 1974 ntBASIC13.77□□□□□ -0.21
CD40P25942 AC116165.1-201ENST00000611806 668 ntBASIC13.77□□□□□ -0.21
CD40P25942 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.77□□□□□ -0.21
CD40P25942 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 AC063926.2-201ENST00000623766 1308 ntBASIC13.77□□□□□ -0.21
CD40P25942 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CD40P25942 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
CD40P25942 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
CD40P25942 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CD40P25942 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40P25942 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.76□□□□□ -0.21
CD40P25942 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.76□□□□□ -0.21
CD40P25942 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CD40P25942 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms