Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCND1P24385 MIR3909-201ENST00000579518 119 ntBASIC16.21■□□□□ 0.19
CCND1P24385 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.21■□□□□ 0.19
CCND1P24385 AC023141.13-201ENST00000604991 943 ntBASIC16.21■□□□□ 0.19
CCND1P24385 AC064836.3-201ENST00000607928 673 ntBASIC16.21■□□□□ 0.19
CCND1P24385 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCND1P24385 AC010507.1-201ENST00000633895 436 ntBASIC16.21■□□□□ 0.19
CCND1P24385 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCND1P24385 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCND1P24385 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.21■□□□□ 0.19
CCND1P24385 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCND1P24385 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCND1P24385 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCND1P24385 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCND1P24385 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCND1P24385 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCND1P24385 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
CCND1P24385 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCND1P24385 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CCND1P24385 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.21■□□□□ 0.18
CCND1P24385 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCND1P24385 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.21■□□□□ 0.18
CCND1P24385 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.21■□□□□ 0.18
CCND1P24385 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCND1P24385 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.2■□□□□ 0.18
CCND1P24385 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.2■□□□□ 0.18
CCND1P24385 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCND1P24385 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.2■□□□□ 0.18
CCND1P24385 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CCND1P24385 AC027601.4-201ENST00000611259 610 ntBASIC16.2■□□□□ 0.18
CCND1P24385 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.2■□□□□ 0.18
CCND1P24385 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.2■□□□□ 0.18
CCND1P24385 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCND1P24385 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.2■□□□□ 0.18
CCND1P24385 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.19■□□□□ 0.18
CCND1P24385 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.19■□□□□ 0.18
CCND1P24385 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.19■□□□□ 0.18
CCND1P24385 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.19■□□□□ 0.18
CCND1P24385 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.19■□□□□ 0.18
CCND1P24385 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCND1P24385 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.19■□□□□ 0.18
CCND1P24385 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCND1P24385 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCND1P24385 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 RNA5SP416-201ENST00000516838 111 ntBASIC16.19■□□□□ 0.18
CCND1P24385 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CCND1P24385 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.19■□□□□ 0.18
CCND1P24385 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.19■□□□□ 0.18
CCND1P24385 FAM197Y3-203ENST00000618346 717 ntBASIC16.19■□□□□ 0.18
CCND1P24385 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.19■□□□□ 0.18
CCND1P24385 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCND1P24385 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCND1P24385 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms