Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SMPD1P17405 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMPD1P17405 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SMPD1P17405 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMPD1P17405 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
SMPD1P17405 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMPD1P17405 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.65■□□□□ 0.42
SMPD1P17405 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMPD1P17405 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMPD1P17405 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
SMPD1P17405 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.64■□□□□ 0.42
SMPD1P17405 DRD5P1-201ENST00000456605 1438 ntBASIC17.64■□□□□ 0.42
SMPD1P17405 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
SMPD1P17405 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMPD1P17405 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
SMPD1P17405 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.64■□□□□ 0.41
SMPD1P17405 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.64■□□□□ 0.41
SMPD1P17405 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.64■□□□□ 0.41
SMPD1P17405 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.64■□□□□ 0.41
SMPD1P17405 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMPD1P17405 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.64■□□□□ 0.41
SMPD1P17405 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.64■□□□□ 0.41
SMPD1P17405 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.64■□□□□ 0.41
SMPD1P17405 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.64■□□□□ 0.41
SMPD1P17405 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.64■□□□□ 0.41
SMPD1P17405 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.64■□□□□ 0.41
SMPD1P17405 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMPD1P17405 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.64■□□□□ 0.41
SMPD1P17405 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SMPD1P17405 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.64■□□□□ 0.41
SMPD1P17405 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.64■□□□□ 0.41
SMPD1P17405 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SMPD1P17405 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.64■□□□□ 0.41
SMPD1P17405 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMPD1P17405 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SMPD1P17405 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMPD1P17405 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMPD1P17405 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMPD1P17405 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 BRWD1P1-201ENST00000401091 371 ntBASIC17.63■□□□□ 0.41
SMPD1P17405 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 AC026954.1-201ENST00000429771 1293 ntBASIC17.63■□□□□ 0.41
SMPD1P17405 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SMPD1P17405 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
SMPD1P17405 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SMPD1P17405 GNRHR2-203ENST00000581100 1187 ntBASIC17.63■□□□□ 0.41
SMPD1P17405 MIR6787-201ENST00000616675 61 ntBASIC17.63■□□□□ 0.41
SMPD1P17405 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.63■□□□□ 0.41
SMPD1P17405 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMPD1P17405 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
SMPD1P17405 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms