Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 AC106886.4-201ENST00000623557 2502 ntBASIC17.94■□□□□ 0.46
HMGCRP04035 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.94■□□□□ 0.46
HMGCRP04035 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
HMGCRP04035 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCRP04035 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCRP04035 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
HMGCRP04035 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGCRP04035 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.93■□□□□ 0.46
HMGCRP04035 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCRP04035 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCRP04035 AC023310.1-201ENST00000554836 735 ntBASIC17.93■□□□□ 0.46
HMGCRP04035 GNRHR2-203ENST00000581100 1187 ntBASIC17.93■□□□□ 0.46
HMGCRP04035 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCRP04035 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.93■□□□□ 0.46
HMGCRP04035 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HMGCRP04035 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.93■□□□□ 0.46
HMGCRP04035 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMGCRP04035 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCRP04035 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.93■□□□□ 0.46
HMGCRP04035 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
HMGCRP04035 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HMGCRP04035 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGCRP04035 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.92■□□□□ 0.46
HMGCRP04035 AC245100.5-201ENST00000452108 331 ntBASIC17.92■□□□□ 0.46
HMGCRP04035 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.92■□□□□ 0.46
HMGCRP04035 SLED1-202ENST00000512051 380 ntBASIC17.92■□□□□ 0.46
HMGCRP04035 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.92■□□□□ 0.46
HMGCRP04035 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCRP04035 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCRP04035 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
HMGCRP04035 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.92■□□□□ 0.46
HMGCRP04035 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
HMGCRP04035 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
HMGCRP04035 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGCRP04035 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGCRP04035 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
HMGCRP04035 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCRP04035 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCRP04035 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 AL603756.1-201ENST00000606511 2163 ntBASIC17.91■□□□□ 0.46
HMGCRP04035 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCRP04035 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCRP04035 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCRP04035 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGCRP04035 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMGCRP04035 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMGCRP04035 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGCRP04035 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMGCRP04035 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCRP04035 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCRP04035 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 KRT18P64-201ENST00000434946 1219 ntBASIC17.91■□□□□ 0.46
HMGCRP04035 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCRP04035 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCRP04035 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCRP04035 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCRP04035 AL021578.1-201ENST00000613646 709 ntBASIC17.91■□□□□ 0.46
HMGCRP04035 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms