Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 LINC01144-201ENST00000626198 1710 ntBASIC16.06■□□□□ 0.16
CBX6O95503 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CBX6O95503 KRT8P39-201ENST00000396270 1433 ntBASIC16.06■□□□□ 0.16
CBX6O95503 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CBX6O95503 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CBX6O95503 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.06■□□□□ 0.16
CBX6O95503 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.06■□□□□ 0.16
CBX6O95503 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.06■□□□□ 0.16
CBX6O95503 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.06■□□□□ 0.16
CBX6O95503 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.06■□□□□ 0.16
CBX6O95503 PGM5P2-202ENST00000637225 1043 ntBASIC16.06■□□□□ 0.16
CBX6O95503 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
CBX6O95503 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 AC005089.1-201ENST00000619486 2241 ntBASIC16.06■□□□□ 0.16
CBX6O95503 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CBX6O95503 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CBX6O95503 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.05■□□□□ 0.16
CBX6O95503 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.05■□□□□ 0.16
CBX6O95503 GPAA1P2-202ENST00000606848 1787 ntBASIC16.05■□□□□ 0.16
CBX6O95503 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CBX6O95503 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.05■□□□□ 0.16
CBX6O95503 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CBX6O95503 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CBX6O95503 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CBX6O95503 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
CBX6O95503 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CBX6O95503 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.05■□□□□ 0.16
CBX6O95503 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.05■□□□□ 0.16
CBX6O95503 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CBX6O95503 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CBX6O95503 MIR648-201ENST00000385046 94 ntBASIC16.05■□□□□ 0.16
CBX6O95503 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.05■□□□□ 0.16
CBX6O95503 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.05■□□□□ 0.16
CBX6O95503 AC064836.3-201ENST00000607928 673 ntBASIC16.05■□□□□ 0.16
CBX6O95503 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CBX6O95503 CICP23-201ENST00000605013 2741 ntBASIC16.05■□□□□ 0.16
CBX6O95503 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CBX6O95503 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.05■□□□□ 0.16
CBX6O95503 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CBX6O95503 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.05■□□□□ 0.16
CBX6O95503 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.04■□□□□ 0.16
CBX6O95503 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CBX6O95503 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.04■□□□□ 0.16
CBX6O95503 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 AC007292.2-201ENST00000593524 1812 ntBASIC16.04■□□□□ 0.16
CBX6O95503 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 MCCD1P2-201ENST00000423228 335 ntBASIC16.04■□□□□ 0.16
CBX6O95503 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.04■□□□□ 0.16
CBX6O95503 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.04■□□□□ 0.16
CBX6O95503 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CBX6O95503 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CBX6O95503 AC005829.1-201ENST00000570002 483 ntBASIC16.04■□□□□ 0.16
CBX6O95503 MIR3197-201ENST00000582241 73 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms