Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST1O76090 TNRC18P3-201ENST00000441896 2691 ntBASIC16.73■□□□□ 0.27
BEST1O76090 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST1O76090 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST1O76090 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
BEST1O76090 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST1O76090 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
BEST1O76090 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST1O76090 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.73■□□□□ 0.27
BEST1O76090 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST1O76090 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.73■□□□□ 0.27
BEST1O76090 AC023310.3-201ENST00000557027 670 ntBASIC16.73■□□□□ 0.27
BEST1O76090 AC100756.1-201ENST00000562736 682 ntBASIC16.73■□□□□ 0.27
BEST1O76090 AC138749.3-201ENST00000567691 622 ntBASIC16.73■□□□□ 0.27
BEST1O76090 AC092337.1-201ENST00000568699 1129 ntBASIC16.73■□□□□ 0.27
BEST1O76090 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 AC116165.1-201ENST00000611806 668 ntBASIC16.73■□□□□ 0.27
BEST1O76090 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST1O76090 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST1O76090 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST1O76090 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST1O76090 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BEST1O76090 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST1O76090 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
BEST1O76090 PRAL-201ENST00000624952 3286 ntBASIC16.72■□□□□ 0.27
BEST1O76090 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
BEST1O76090 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.72■□□□□ 0.27
BEST1O76090 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.72■□□□□ 0.27
BEST1O76090 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
BEST1O76090 AC190387.1-201ENST00000551683 408 ntBASIC16.72■□□□□ 0.27
BEST1O76090 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 AC004233.3-201ENST00000607794 1269 ntBASIC16.72■□□□□ 0.27
BEST1O76090 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 AC008741.2-201ENST00000612792 3115 ntBASIC16.72■□□□□ 0.27
BEST1O76090 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST1O76090 AL365203.3-201ENST00000609742 2057 ntBASIC16.72■□□□□ 0.27
BEST1O76090 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
BEST1O76090 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 AC007541.1-201ENST00000570282 1469 ntBASIC16.72■□□□□ 0.27
BEST1O76090 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST1O76090 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.71■□□□□ 0.27
BEST1O76090 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BEST1O76090 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms