Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN1O60925 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.29□□□□□ -0.12
PFDN1O60925 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PFDN1O60925 AL023284.2-201ENST00000405850 579 ntBASIC14.29□□□□□ -0.12
PFDN1O60925 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.29□□□□□ -0.12
PFDN1O60925 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PFDN1O60925 AL139246.5-201ENST00000606645 996 ntBASIC14.29□□□□□ -0.12
PFDN1O60925 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
PFDN1O60925 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
PFDN1O60925 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.29□□□□□ -0.12
PFDN1O60925 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.29□□□□□ -0.12
PFDN1O60925 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
PFDN1O60925 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN1O60925 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.29□□□□□ -0.12
PFDN1O60925 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PFDN1O60925 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
PFDN1O60925 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 AC007322.1-201ENST00000426983 750 ntBASIC14.28□□□□□ -0.12
PFDN1O60925 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.28□□□□□ -0.12
PFDN1O60925 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.28□□□□□ -0.12
PFDN1O60925 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 AC137761.2-201ENST00000561729 223 ntBASIC14.28□□□□□ -0.12
PFDN1O60925 AC145350.3-201ENST00000569033 163 ntBASIC14.28□□□□□ -0.12
PFDN1O60925 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 AC004264.1-201ENST00000608354 794 ntBASIC14.28□□□□□ -0.12
PFDN1O60925 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.28□□□□□ -0.12
PFDN1O60925 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PFDN1O60925 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PFDN1O60925 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN1O60925 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN1O60925 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.27□□□□□ -0.12
PFDN1O60925 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
PFDN1O60925 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PFDN1O60925 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.27□□□□□ -0.12
PFDN1O60925 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
PFDN1O60925 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.27□□□□□ -0.12
PFDN1O60925 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PFDN1O60925 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN1O60925 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.27□□□□□ -0.12
PFDN1O60925 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN1O60925 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms