Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.14□□□□□ -0.31
SSSCA1O60232 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.14□□□□□ -0.31
SSSCA1O60232 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSSCA1O60232 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSSCA1O60232 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SSSCA1O60232 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSSCA1O60232 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSSCA1O60232 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SSSCA1O60232 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SSSCA1O60232 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSSCA1O60232 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.14□□□□□ -0.31
SSSCA1O60232 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SSSCA1O60232 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SSSCA1O60232 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.14□□□□□ -0.31
SSSCA1O60232 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SSSCA1O60232 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SSSCA1O60232 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.13□□□□□ -0.31
SSSCA1O60232 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SSSCA1O60232 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 AC092127.1-201ENST00000567093 3455 ntBASIC13.13□□□□□ -0.31
SSSCA1O60232 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SSSCA1O60232 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.13□□□□□ -0.31
SSSCA1O60232 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
SSSCA1O60232 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.13□□□□□ -0.31
SSSCA1O60232 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.13□□□□□ -0.31
SSSCA1O60232 AP000867.3-201ENST00000524675 377 ntBASIC13.13□□□□□ -0.31
SSSCA1O60232 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.13□□□□□ -0.31
SSSCA1O60232 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 AC099336.1-202ENST00000602961 463 ntBASIC13.13□□□□□ -0.31
SSSCA1O60232 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.13□□□□□ -0.31
SSSCA1O60232 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 AC005089.1-201ENST00000619486 2241 ntBASIC13.13□□□□□ -0.31
SSSCA1O60232 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.13□□□□□ -0.31
SSSCA1O60232 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SSSCA1O60232 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.13□□□□□ -0.31
SSSCA1O60232 AC005332.1-201ENST00000577698 1310 ntBASIC13.13□□□□□ -0.31
SSSCA1O60232 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SSSCA1O60232 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 AC105250.1-201ENST00000509378 2057 ntBASIC13.12□□□□□ -0.31
SSSCA1O60232 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.12□□□□□ -0.31
SSSCA1O60232 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SSSCA1O60232 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SSSCA1O60232 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.12□□□□□ -0.31
SSSCA1O60232 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.12□□□□□ -0.31
SSSCA1O60232 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.12□□□□□ -0.31
SSSCA1O60232 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.12□□□□□ -0.31
SSSCA1O60232 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.12□□□□□ -0.31
SSSCA1O60232 AC139887.3-201ENST00000568585 713 ntBASIC13.12□□□□□ -0.31
SSSCA1O60232 NKAPP1-205ENST00000585790 367 ntBASIC13.12□□□□□ -0.31
SSSCA1O60232 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SSSCA1O60232 AL591684.3-201ENST00000605187 298 ntBASIC13.12□□□□□ -0.31
SSSCA1O60232 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SSSCA1O60232 AL139288.1-201ENST00000623748 933 ntBASIC13.12□□□□□ -0.31
SSSCA1O60232 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms