Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
IDH3BO43837 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.82□□□□□ -0.04
IDH3BO43837 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
IDH3BO43837 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
IDH3BO43837 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
IDH3BO43837 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.82□□□□□ -0.04
IDH3BO43837 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IDH3BO43837 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.82□□□□□ -0.04
IDH3BO43837 AL592424.1-201ENST00000563624 1536 ntBASIC14.82□□□□□ -0.04
IDH3BO43837 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
IDH3BO43837 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.81□□□□□ -0.04
IDH3BO43837 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
IDH3BO43837 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
IDH3BO43837 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.81□□□□□ -0.04
IDH3BO43837 FAM185BP-201ENST00000443595 716 ntBASIC14.81□□□□□ -0.04
IDH3BO43837 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.81□□□□□ -0.04
IDH3BO43837 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.81□□□□□ -0.04
IDH3BO43837 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.81□□□□□ -0.04
IDH3BO43837 IFNL4P1-201ENST00000607083 540 ntBASIC14.81□□□□□ -0.04
IDH3BO43837 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
IDH3BO43837 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
IDH3BO43837 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.81□□□□□ -0.04
IDH3BO43837 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IDH3BO43837 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.81□□□□□ -0.04
IDH3BO43837 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.8□□□□□ -0.04
IDH3BO43837 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.8□□□□□ -0.04
IDH3BO43837 AC005622.1-201ENST00000636801 1703 ntBASIC14.8□□□□□ -0.04
IDH3BO43837 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.8□□□□□ -0.04
IDH3BO43837 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
IDH3BO43837 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
IDH3BO43837 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 AC015656.1-201ENST00000624209 3578 ntBASIC14.8□□□□□ -0.04
IDH3BO43837 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
IDH3BO43837 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
IDH3BO43837 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.8□□□□□ -0.04
IDH3BO43837 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.8□□□□□ -0.04
IDH3BO43837 PMS2P4-201ENST00000412466 1052 ntBASIC14.8□□□□□ -0.04
IDH3BO43837 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.8□□□□□ -0.04
IDH3BO43837 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.8□□□□□ -0.04
IDH3BO43837 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.8□□□□□ -0.04
IDH3BO43837 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.8□□□□□ -0.04
IDH3BO43837 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
IDH3BO43837 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.8□□□□□ -0.04
IDH3BO43837 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.8□□□□□ -0.04
IDH3BO43837 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
IDH3BO43837 TP73-AS1-207ENST00000624167 988 ntBASIC14.8□□□□□ -0.04
IDH3BO43837 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
IDH3BO43837 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IDH3BO43837 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms