Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.19■□□□□ 0.18
KDELR3O43731 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
KDELR3O43731 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDELR3O43731 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KDELR3O43731 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.18■□□□□ 0.18
KDELR3O43731 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 AL607033.1-201ENST00000623900 1599 ntBASIC16.18■□□□□ 0.18
KDELR3O43731 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.18■□□□□ 0.18
KDELR3O43731 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
KDELR3O43731 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 AC074338.1-201ENST00000416825 156 ntBASIC16.18■□□□□ 0.18
KDELR3O43731 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.18■□□□□ 0.18
KDELR3O43731 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.18■□□□□ 0.18
KDELR3O43731 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.18■□□□□ 0.18
KDELR3O43731 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.18■□□□□ 0.18
KDELR3O43731 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.18■□□□□ 0.18
KDELR3O43731 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KDELR3O43731 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KDELR3O43731 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.18■□□□□ 0.18
KDELR3O43731 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.18■□□□□ 0.18
KDELR3O43731 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDELR3O43731 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
KDELR3O43731 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
KDELR3O43731 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.17■□□□□ 0.18
KDELR3O43731 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.17■□□□□ 0.18
KDELR3O43731 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KDELR3O43731 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.17■□□□□ 0.18
KDELR3O43731 FAM207CP-201ENST00000443486 507 ntBASIC16.17■□□□□ 0.18
KDELR3O43731 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.17■□□□□ 0.18
KDELR3O43731 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.17■□□□□ 0.18
KDELR3O43731 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.17■□□□□ 0.18
KDELR3O43731 MIR4745-201ENST00000577608 62 ntBASIC16.17■□□□□ 0.18
KDELR3O43731 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
KDELR3O43731 AC092364.2-202ENST00000597012 1073 ntBASIC16.17■□□□□ 0.18
KDELR3O43731 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
KDELR3O43731 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.17■□□□□ 0.18
KDELR3O43731 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KDELR3O43731 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDELR3O43731 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
KDELR3O43731 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.17■□□□□ 0.18
KDELR3O43731 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms