Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.76■□□□□ 0.11
VGLL3A8MV65 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 SNORA78-201ENST00000459373 127 ntBASIC15.76■□□□□ 0.11
VGLL3A8MV65 AP002982.1-201ENST00000492365 877 ntBASIC15.76■□□□□ 0.11
VGLL3A8MV65 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 MIR4785-201ENST00000585005 73 ntBASIC15.76■□□□□ 0.11
VGLL3A8MV65 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.76■□□□□ 0.11
VGLL3A8MV65 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VGLL3A8MV65 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 AL583810.2-201ENST00000556430 3254 ntBASIC15.75■□□□□ 0.11
VGLL3A8MV65 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 NIFKP9-201ENST00000419265 221 ntBASIC15.75■□□□□ 0.11
VGLL3A8MV65 KSR1P1-201ENST00000446298 240 ntBASIC15.75■□□□□ 0.11
VGLL3A8MV65 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 AC130686.1-201ENST00000622936 2466 ntBASIC15.75■□□□□ 0.11
VGLL3A8MV65 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VGLL3A8MV65 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VGLL3A8MV65 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 AC011474.4-201ENST00000623523 2076 ntBASIC15.74■□□□□ 0.11
VGLL3A8MV65 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.74■□□□□ 0.11
VGLL3A8MV65 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VGLL3A8MV65 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms