Protein–RNA interactions for Protein: Q9NRG1

PRTFDC1, Phosphoribosyltransferase domain-containing protein 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTFDC1Q9NRG1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 MIR770-201ENST00000390219 98 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 BASP1P1-201ENST00000430708 665 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AC241585.1-201ENST00000433527 519 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AL603832.2-201ENST00000566195 2125 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AC005498.2-205ENST00000593218 784 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AL390955.2-201ENST00000603032 514 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AC024909.3-201ENST00000611513 2257 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AC100757.3-201ENST00000622361 1406 ntBASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PRTFDC1Q9NRG1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.05■□□□□ 0
PRTFDC1Q9NRG1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
PRTFDC1Q9NRG1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.05■□□□□ 0
PRTFDC1Q9NRG1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.05■□□□□ 0
PRTFDC1Q9NRG1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.05■□□□□ 0
PRTFDC1Q9NRG1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PRTFDC1Q9NRG1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 MIR6069-201ENST00000620069 79 ntBASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 AL590560.3-201ENST00000623350 461 ntBASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PRTFDC1Q9NRG1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 PKD1P5-201ENST00000532415 10291 ntBASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.04■□□□□ -0
PRTFDC1Q9NRG1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms