Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 RPS8P6-201ENST00000426177 609 ntBASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 AP000347.1-202ENST00000435868 847 ntBASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 AC055717.3-201ENST00000622967 595 ntBASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LRRC40Q9H9A6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 AC004987.2-201ENST00000395959 1148 ntBASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 SLC25A39P2-201ENST00000537614 270 ntBASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 AC105339.1-204ENST00000636249 355 ntBASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.29■□□□□ 0.2
LRRC40Q9H9A6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 YBX1P5-201ENST00000509441 847 ntBASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 AC022145.2-201ENST00000598203 171 ntBASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 AC026979.3-201ENST00000607315 403 ntBASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC40Q9H9A6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms