Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 AC087481.3-201ENST00000602886 1894 ntBASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 HMGA1P7-201ENST00000406908 502 ntBASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 AC027612.4-201ENST00000605371 583 ntBASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 ACTL9-202ENST00000612068 1252 ntBASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 AC091812.2-201ENST00000619081 385 ntBASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXP3Q9BZS1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXP3Q9BZS1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 AC007064.4-201ENST00000637740 555 ntBASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 AP001282.1-201ENST00000531301 1499 ntBASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXP3Q9BZS1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXP3Q9BZS1 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms