Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ALG1L8P-201ENST00000533887 760 ntBASIC14.46□□□□□ -0.09
USB1Q9BQ65 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 AC024909.3-201ENST00000611513 2257 ntBASIC14.46□□□□□ -0.09
USB1Q9BQ65 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.46□□□□□ -0.09
USB1Q9BQ65 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
USB1Q9BQ65 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
USB1Q9BQ65 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
USB1Q9BQ65 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
USB1Q9BQ65 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
USB1Q9BQ65 AC005915.1-201ENST00000624912 2018 ntBASIC14.46□□□□□ -0.1
USB1Q9BQ65 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
USB1Q9BQ65 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
USB1Q9BQ65 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
USB1Q9BQ65 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 AC098859.1-201ENST00000502915 1238 ntBASIC14.45□□□□□ -0.1
USB1Q9BQ65 AC109322.1-201ENST00000524499 1264 ntBASIC14.45□□□□□ -0.1
USB1Q9BQ65 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 TMF1P1-201ENST00000576058 373 ntBASIC14.45□□□□□ -0.1
USB1Q9BQ65 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 AC011467.4-201ENST00000594891 528 ntBASIC14.45□□□□□ -0.1
USB1Q9BQ65 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 AC092953.2-201ENST00000608000 699 ntBASIC14.45□□□□□ -0.1
USB1Q9BQ65 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.45□□□□□ -0.1
USB1Q9BQ65 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
USB1Q9BQ65 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.45□□□□□ -0.1
USB1Q9BQ65 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 AC105917.1-201ENST00000506637 2539 ntBASIC14.44□□□□□ -0.1
USB1Q9BQ65 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
USB1Q9BQ65 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 HLA-H-201ENST00000383620 1096 ntBASIC14.44□□□□□ -0.1
USB1Q9BQ65 MIR770-201ENST00000390219 98 ntBASIC14.44□□□□□ -0.1
USB1Q9BQ65 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.44□□□□□ -0.1
USB1Q9BQ65 FAM58DP-201ENST00000428076 619 ntBASIC14.44□□□□□ -0.1
USB1Q9BQ65 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms