Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 RDX-218ENST00000544551 4117 ntTSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 AC073621.1-201ENST00000392730 636 ntBASIC18.38■□□□□ 0.53
ARID3AQ99856 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.38■□□□□ 0.53
ARID3AQ99856 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.38■□□□□ 0.53
ARID3AQ99856 RNA5SP419-201ENST00000515908 135 ntBASIC18.38■□□□□ 0.53
ARID3AQ99856 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 FAM215A-202ENST00000632077 792 ntBASIC18.38■□□□□ 0.53
ARID3AQ99856 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 AP002414.3-201ENST00000589352 1468 ntBASIC18.38■□□□□ 0.53
ARID3AQ99856 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ARID3AQ99856 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ARID3AQ99856 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ARID3AQ99856 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
ARID3AQ99856 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.37■□□□□ 0.53
ARID3AQ99856 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.37■□□□□ 0.53
ARID3AQ99856 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.37■□□□□ 0.53
ARID3AQ99856 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ARID3AQ99856 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.37■□□□□ 0.53
ARID3AQ99856 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.37■□□□□ 0.53
ARID3AQ99856 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ARID3AQ99856 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.37■□□□□ 0.53
ARID3AQ99856 AC008735.5-201ENST00000623544 497 ntBASIC18.37■□□□□ 0.53
ARID3AQ99856 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC18.37■□□□□ 0.53
ARID3AQ99856 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ARID3AQ99856 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.37■□□□□ 0.53
ARID3AQ99856 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ARID3AQ99856 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.36■□□□□ 0.53
ARID3AQ99856 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 PTCHD3P3-201ENST00000403073 906 ntBASIC18.36■□□□□ 0.53
ARID3AQ99856 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ARID3AQ99856 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.36■□□□□ 0.53
ARID3AQ99856 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.36■□□□□ 0.53
ARID3AQ99856 FDX1P1-201ENST00000449115 551 ntBASIC18.36■□□□□ 0.53
ARID3AQ99856 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.36■□□□□ 0.53
ARID3AQ99856 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ARID3AQ99856 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
ARID3AQ99856 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.36■□□□□ 0.53
ARID3AQ99856 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ARID3AQ99856 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms