Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 HMGA1P5-201ENST00000412453 271 ntBASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RAB3IPQ96QF0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 AC092127.1-201ENST00000567093 3455 ntBASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 AC005622.1-201ENST00000636801 1703 ntBASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 ECEL1P3-201ENST00000427961 737 ntBASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 KRT8P44-201ENST00000441609 1350 ntBASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 LINC01568-207ENST00000641790 1380 ntBASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IPQ96QF0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IPQ96QF0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IPQ96QF0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IPQ96QF0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IPQ96QF0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
RAB3IPQ96QF0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB3IPQ96QF0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IPQ96QF0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms