Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NEK1Q96PY6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 LINC02084-201ENST00000606069 1096 ntBASIC18.97■□□□□ 0.63
NEK1Q96PY6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.97■□□□□ 0.63
NEK1Q96PY6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NEK1Q96PY6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
NEK1Q96PY6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NEK1Q96PY6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 CICP13-201ENST00000422015 2789 ntBASIC18.96■□□□□ 0.63
NEK1Q96PY6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 AP001059.3-201ENST00000619053 235 ntBASIC18.96■□□□□ 0.63
NEK1Q96PY6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.96■□□□□ 0.63
NEK1Q96PY6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NEK1Q96PY6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 EEF1DP4-201ENST00000446006 880 ntBASIC18.95■□□□□ 0.62
NEK1Q96PY6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NEK1Q96PY6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NEK1Q96PY6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.94■□□□□ 0.62
NEK1Q96PY6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 MIR4453-201ENST00000584019 89 ntBASIC18.94■□□□□ 0.62
NEK1Q96PY6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 RN7SL828P-201ENST00000607615 303 ntBASIC18.94■□□□□ 0.62
NEK1Q96PY6 AC007967.4-201ENST00000614700 386 ntBASIC18.94■□□□□ 0.62
NEK1Q96PY6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms