Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 AP003680.1-201ENST00000598970 3660 ntBASIC15.22■□□□□ 0.03
COL21A1Q96P44 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 SPDYE11-202ENST00000450699 704 ntBASIC15.22■□□□□ 0.03
COL21A1Q96P44 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 AL135744.1-201ENST00000565098 629 ntBASIC15.22■□□□□ 0.03
COL21A1Q96P44 SPDYE9P-201ENST00000570642 692 ntBASIC15.22■□□□□ 0.03
COL21A1Q96P44 AC026120.1-201ENST00000611536 926 ntBASIC15.22■□□□□ 0.03
COL21A1Q96P44 SPDYE10P-202ENST00000612005 668 ntBASIC15.22■□□□□ 0.03
COL21A1Q96P44 SPDYE8P-202ENST00000612377 668 ntBASIC15.22■□□□□ 0.03
COL21A1Q96P44 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
COL21A1Q96P44 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
COL21A1Q96P44 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 AC073347.1-201ENST00000421633 2643 ntBASIC15.21■□□□□ 0.03
COL21A1Q96P44 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 MIR1233-2-201ENST00000408138 82 ntBASIC15.21■□□□□ 0.03
COL21A1Q96P44 MIR1233-1-201ENST00000408722 82 ntBASIC15.21■□□□□ 0.03
COL21A1Q96P44 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 ADH5P3-201ENST00000433842 1137 ntBASIC15.21■□□□□ 0.03
COL21A1Q96P44 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
COL21A1Q96P44 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
COL21A1Q96P44 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
COL21A1Q96P44 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
COL21A1Q96P44 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
COL21A1Q96P44 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
COL21A1Q96P44 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
COL21A1Q96P44 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.2■□□□□ 0.02
COL21A1Q96P44 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
COL21A1Q96P44 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms