Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 FAM8A3P-201ENST00000427218 844 ntBASIC13.84□□□□□ -0.19
CMTM3Q96MX0 TSSC2-201ENST00000450217 709 ntBASIC13.84□□□□□ -0.19
CMTM3Q96MX0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 MIR4321-201ENST00000592276 80 ntBASIC13.84□□□□□ -0.19
CMTM3Q96MX0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CMTM3Q96MX0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.83□□□□□ -0.19
CMTM3Q96MX0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 RCN1P1-201ENST00000400413 996 ntBASIC13.83□□□□□ -0.2
CMTM3Q96MX0 PMS2P4-201ENST00000412466 1052 ntBASIC13.83□□□□□ -0.2
CMTM3Q96MX0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 AC074051.2-201ENST00000565115 352 ntBASIC13.83□□□□□ -0.2
CMTM3Q96MX0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 AL591684.3-201ENST00000605187 298 ntBASIC13.83□□□□□ -0.2
CMTM3Q96MX0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 PCDHA3-202ENST00000532566 4594 ntBASIC13.83□□□□□ -0.2
CMTM3Q96MX0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMTM3Q96MX0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.82□□□□□ -0.2
CMTM3Q96MX0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms