Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 MIR661-201ENST00000384842 89 ntBASIC21.37■■□□□ 1.01
CFAP53Q96M91 AC236430.1-201ENST00000402231 743 ntBASIC21.37■■□□□ 1.01
CFAP53Q96M91 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 AC002472.2-201ENST00000442739 958 ntBASIC21.37■■□□□ 1.01
CFAP53Q96M91 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 LINC02560-201ENST00000596379 459 ntBASIC21.37■■□□□ 1.01
CFAP53Q96M91 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 BANP-204ENST00000393208 2283 ntTSL 2 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CFAP53Q96M91 Z97205.2-201ENST00000564697 1639 ntBASIC21.37■■□□□ 1.01
CFAP53Q96M91 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.37■■□□□ 1.01
CFAP53Q96M91 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 AC024909.3-201ENST00000611513 2257 ntBASIC21.36■■□□□ 1.01
CFAP53Q96M91 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 SERBP1P5-201ENST00000510079 1181 ntBASIC21.36■■□□□ 1.01
CFAP53Q96M91 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.36■■□□□ 1.01
CFAP53Q96M91 AC008761.3-201ENST00000624803 892 ntBASIC21.36■■□□□ 1.01
CFAP53Q96M91 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CFAP53Q96M91 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.36■■□□□ 1.01
CFAP53Q96M91 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.35■■□□□ 1.01
CFAP53Q96M91 AC112504.1-201ENST00000623415 1841 ntBASIC21.35■■□□□ 1.01
CFAP53Q96M91 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 RNA5-8SN1-201ENST00000610460 153 ntBASIC21.35■■□□□ 1.01
CFAP53Q96M91 RNA5-8SN5-202ENST00000612463 153 ntBASIC21.35■■□□□ 1.01
CFAP53Q96M91 RNA5-8SN4-201ENST00000613359 153 ntBASIC21.35■■□□□ 1.01
CFAP53Q96M91 RNA5-8SN5-201ENST00000619471 153 ntBASIC21.35■■□□□ 1.01
CFAP53Q96M91 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 AC004461.2-201ENST00000629517 803 ntBASIC21.35■■□□□ 1.01
CFAP53Q96M91 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms