Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 C2orf69P3-201ENST00000565542 1120 ntBASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.71□□□□□ -0.53
CHCHD1Q96BP2 AC092135.3-201ENST00000624151 1846 ntBASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
CHCHD1Q96BP2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 CICP17-201ENST00000418553 2377 ntBASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 RNA5SP413-201ENST00000516373 109 ntBASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 AL137784.2-201ENST00000607332 1000 ntBASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 AC079602.3-201ENST00000623931 403 ntBASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 ABR-205ENST00000544583 5595 ntTSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CHCHD1Q96BP2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHCHD1Q96BP2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.69□□□□□ -0.54
CHCHD1Q96BP2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms