Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNOT9Q92600 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNOT9Q92600 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.83□□□□□ -0.03
CNOT9Q92600 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
CNOT9Q92600 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.83□□□□□ -0.03
CNOT9Q92600 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.83□□□□□ -0.03
CNOT9Q92600 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CNOT9Q92600 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT9Q92600 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
CNOT9Q92600 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 MIR346-201ENST00000362234 95 ntBASIC14.83□□□□□ -0.04
CNOT9Q92600 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.83□□□□□ -0.04
CNOT9Q92600 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.83□□□□□ -0.04
CNOT9Q92600 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.83□□□□□ -0.04
CNOT9Q92600 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
CNOT9Q92600 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.83□□□□□ -0.04
CNOT9Q92600 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT9Q92600 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.83□□□□□ -0.04
CNOT9Q92600 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
CNOT9Q92600 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT9Q92600 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT9Q92600 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CNOT9Q92600 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CNOT9Q92600 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT9Q92600 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CNOT9Q92600 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 AC134407.2-201ENST00000625089 1978 ntBASIC14.82□□□□□ -0.04
CNOT9Q92600 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT9Q92600 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CNOT9Q92600 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT9Q92600 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT9Q92600 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT9Q92600 RNA5SP410-201ENST00000516285 106 ntBASIC14.82□□□□□ -0.04
CNOT9Q92600 IGHV3-62-201ENST00000520057 340 ntBASIC14.82□□□□□ -0.04
CNOT9Q92600 AC024267.1-201ENST00000582320 895 ntBASIC14.82□□□□□ -0.04
CNOT9Q92600 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT9Q92600 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CNOT9Q92600 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CNOT9Q92600 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT9Q92600 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNOT9Q92600 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNOT9Q92600 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CNOT9Q92600 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT9Q92600 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT9Q92600 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT9Q92600 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT9Q92600 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CNOT9Q92600 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT9Q92600 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT9Q92600 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT9Q92600 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT9Q92600 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CNOT9Q92600 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CNOT9Q92600 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CNOT9Q92600 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT9Q92600 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.81□□□□□ -0.04
CNOT9Q92600 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CNOT9Q92600 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT9Q92600 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT9Q92600 AL592309.1-201ENST00000443127 649 ntBASIC14.81□□□□□ -0.04
CNOT9Q92600 CEND1P1-201ENST00000451006 455 ntBASIC14.81□□□□□ -0.04
CNOT9Q92600 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.81□□□□□ -0.04
CNOT9Q92600 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT9Q92600 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.81□□□□□ -0.04
CNOT9Q92600 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.81□□□□□ -0.04
CNOT9Q92600 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms