Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH19Q8TAB3 AC092384.3-202ENST00000564646 2873 ntBASIC16.55■□□□□ 0.24
PCDH19Q8TAB3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDH19Q8TAB3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDH19Q8TAB3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 AC026150.2-201ENST00000564693 1156 ntBASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 AC018529.1-201ENST00000613063 361 ntBASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 AC009093.7-201ENST00000623853 1223 ntBASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
PCDH19Q8TAB3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 EEF1DP4-201ENST00000446006 880 ntBASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 AC004449.1-201ENST00000564240 433 ntBASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 MIR4313-201ENST00000580760 101 ntBASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 KRT8P37-201ENST00000451609 1420 ntBASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH19Q8TAB3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH19Q8TAB3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms