Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 MIR661-201ENST00000384842 89 ntBASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 AC098859.1-201ENST00000502915 1238 ntBASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 RNA5SP410-201ENST00000516285 106 ntBASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDND2Q8NHS1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AC100757.3-201ENST00000622361 1406 ntBASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AL645728.1-201ENST00000366221 2101 ntBASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 FAM207CP-201ENST00000443486 507 ntBASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 LINC02560-201ENST00000596379 459 ntBASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AL138828.2-201ENST00000615812 383 ntBASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 AL590560.3-201ENST00000623350 461 ntBASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDND2Q8NHS1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms