Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AL365203.3-201ENST00000609742 2057 ntBASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 GPS2P2-201ENST00000430745 888 ntBASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AC005237.2-201ENST00000434368 219 ntBASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AC027612.4-201ENST00000605371 583 ntBASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AC084121.4-201ENST00000641598 221 ntBASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AF228730.8-201ENST00000642140 221 ntBASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SIMC1Q8NDZ2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 AL627223.1-201ENST00000416693 442 ntBASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 DNAJB3-202ENST00000449667 1266 ntBASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 AC004967.1-201ENST00000453589 447 ntBASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 AC098859.1-201ENST00000502915 1238 ntBASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 CDC14C-201ENST00000428251 1719 ntBASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SIMC1Q8NDZ2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms