Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPOQ8N3V7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 AL603756.1-201ENST00000606511 2163 ntBASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 ANKRD19P-201ENST00000338192 862 ntBASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 EEF1DP4-201ENST00000446006 880 ntBASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 BNIP3P42-201ENST00000454982 569 ntBASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 BNIP3P29-201ENST00000598302 571 ntBASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 AC011447.5-201ENST00000616168 564 ntBASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SYNPOQ8N3V7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SYNPOQ8N3V7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms