Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC105Q8IYK2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC105Q8IYK2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC105Q8IYK2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CCDC105Q8IYK2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC105Q8IYK2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 AL596257.1-201ENST00000641463 2694 ntBASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 KRT17P7-201ENST00000451704 1104 ntBASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 IGHV3-62-201ENST00000520057 340 ntBASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 AC009118.2-201ENST00000613275 655 ntBASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC105Q8IYK2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 SNX33P1-201ENST00000592116 1762 ntBASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 KRT8P23-201ENST00000560090 1207 ntBASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 LINC01225-203ENST00000563550 1244 ntBASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 GGT4P-201ENST00000623672 1708 ntBASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 AL512652.2-201ENST00000625156 1716 ntBASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC105Q8IYK2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms